BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB019A03LP1|AL427409
(996 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1798 1704 0.0
>3x_Contig1798
Length = 38968
Score = 1704 bits (840), Expect = 0.0
Identities = 914/958 (95%), Gaps = 2/958 (0%)
Strand = Plus / Plus
Query: 5 ggaattgccgttcttcctaattcctatctctgattatcacctgtccyttcaaatcattcg 64
||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct: 5431 ggaattgccgttcttcctaattcctatctctgattatgacctgtcctttcaaatcattcg 5490
Query: 65 aacaattttatttagtttggaatttgaatttttttttttcaagctttcacgctggaaaaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5491 aacaattttatttagtttggaatttgaatttttttttttcaagctttcacgctggaaaaa 5550
Query: 125 ttccaaaammagttttgactcactgacgatattyaaactcatgcmacatcctaccattca 184
|||||||| ||||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 5551 ttccaaaaaaagttttgactcactgacgatatttaaactcatgcaacatcctaccattca 5610
Query: 185 atggatacattaacatgtgtcagtmgctgcgttgtacattggtaccatactgtccatctc 244
|||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||
Sbjct: 5611 atggatacattaacatgtgtaagtagctgcgttgtacattggtaccatactgtccatctc 5670
Query: 245 tactgaataamamacggtaaatcacataasamgtscygcyaaccatcatggatttagtga 304
|||||||||| | |||||||||||||||| | || | || ||||||||||||||||||||
Sbjct: 5671 tactgaataaaaaacggtaaatcacataagaagtgctgctaaccatcatggatttagtga 5730
Query: 305 atcatttgaacgacaagcyactctttgccattccaaagamaggtagattatatgasamga 364
|||||||||||||||||| |||||||||||||||||||| ||||||||||||||| | ||
Sbjct: 5731 atcatttgaacgacaagctactctttgccattccaaagaaaggtagattatatgagaaga 5790
Query: 365 gtgtytctatcttaaagggctctgatatcaagttccaccggtcagcmagattggatatyg 424
|||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
Sbjct: 5791 gtgtttctatcttaaagggctctgatatcaagttccaccggtcagcaagattggatattg 5850
Query: 425 caatttccacaaatatgcctgtcgcattgattttcttaccagctgccgacattccaatgt 484
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 5851 caatttccacaaatatgcctgttgcattgattttcttaccagctgccgacattccaatgt 5910
Query: 485 ttgtyggagaaggtagatgtcaccygggtattacgggagtcgatcaagtcagagaaagtc 544
|||| ||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||
Sbjct: 5911 ttgttggagaaggtagatgtgacctgggtattacgggagtggatcaagtcagagaaagtg 5970
Query: 545 aagttgatgtcaatttacctattgayttacagtytgggactygtmagcctcaggtccagg 604
|||||||||| |||||||||||||| ||||||| ||||||| || ||| |||||||||||
Sbjct: 5971 aagttgatgttaatttacctattgatttacagtttgggacttgtaagcttcaggtccagg 6030
Query: 605 tccctgtygccggagagtatacytcaccagaacaattaaytggtaagacaatcgtttcca 664
||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||
Sbjct: 6031 tccctgttgccggagagtatacttcaccagaacaattaattggtaagacaatcgtttcca 6090
Query: 665 gttttgtgaatttgactaawaaatacttcgcacaattggaaggtgtgcctgaatccgaaa 724
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 6091 gttttgtgaatttgactaaaaaatacttcgcacaattggaaggtgtgcctgaatccgaaa 6150
Query: 725 tggtcactagggtcaaatacgttggtggatccgtggaagcatcttgtgctttaggtgttg 784
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6151 tggtcactagggtcaaatacgttggtggatccgtggaagcatcttgtgctttaggtgttg 6210
Query: 785 ctgacgctatcgtagatttagtcgaatctggagaaaccatgcgcgcygctgggttgaccg 844
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 6211 ctgacgctatcgtagatttagtcgaatctggagaaaccatgcgcgctgctgggttgaccg 6270
Query: 845 ctattgcaactgtattggatacaagtkcacatctaatcgaatccaaaaamtccaaaggga 904
|||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||
Sbjct: 6271 ctattgcaactgtattggatacaagtgcacatctaatcgaatccaaaaa-tccaaaggga 6329
Query: 905 gatgttgaacttctcagaactataaaatcaagaatagaaggkgt-atgactgcccaaa 961
||||||||||||||||||||||||||||||||||||||||| || |||||||| ||||
Sbjct: 6330 gatgttgaacttctcagaactataaaatcaagaatagaaggtgtcatgactgctcaaa 6387
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.41 0.716 1.33
Gapped
Lambda K H
1.41 0.716 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 10,518
Number of Sequences: 1807
Number of extensions: 10518
Number of successful extensions: 182
Number of sequences better than 1.0e-20: 1
length of query: 996
length of database: 10,358,551
effective HSP length: 16
effective length of query: 980
effective length of database: 10,329,639
effective search space: 10123046220
effective search space used: 10123046220
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.4 bits)
S1: 12 (24.8 bits)
S2: 49 (99.9 bits)